Spotlight on

Microbiome

Every complex organism – human, animal or plant – relies on a vast community of microorganisms that live in, on and around it. In humans, this “microbiome” is vital for healthy development and immune balance. Similarly, plants depend on rich microbial communities in the soil, on their roots, on their leaves and within their tissues. These microbial partners influence nutrient uptake, stress resilience, and disease resistance. 

For humans, the microbiome begins to form at birth and is shaped by environment, lifestyle and diet. For plants, the microbiome assembles at germination, drawing from the soil, seed coatings and surrounding environment. In both systems, microbiomes are deeply personal, dynamic and play foundational roles that are integral to health.

We carry trillions of bacteria, fungi, viruses and other microorganisms – so many that, by cell count, we are more microbe than human. They help to maintain immune balance, metabolism and overall health. Disruptions to the human microbiome can result in inflammatory and metabolic diseases. Likewise, plant microbiomes are now recognised as critical determinants of crop yield. Disturbances to plant microbial communities can leave them vulnerable to pathogens or environmental stress. In both fields, research increasingly reveals complex signalling networks between microbes and host immune systems that maintain this delicate interdependence.

As understanding of these complex communities and their influence on critical processes grows, so does interest in microbiome based interventions. In medicine, therapies that restore beneficial microbes are being explored for treating diseases once thought unconnected to microbes. In agriculture, new tools aim to engineer, enrich or reintroduce helpful microbes – including microbial inoculants, biostimulants, biocontrol agents, soil microbiome enhancers and the technologies used to deliver them.

Both the human and agricultural microbiome sectors are now growing into multi billion dollar markets. Many challenges remain, not least ensuring that the regulatory and intellectual property (IP) systems effectively support innovation in this area. 

As these markets mature, robust intellectual property protection and an awareness of competitor activities become increasingly critical, particularly where products can be reverse engineered and copied once they reach the market. At the same time, microbiome technologies encounter IP challenges that differ from those in more conventional biotech sectors, demanding especially careful handling. Navigating this landscape requires thoughtful planning, an alertness to legal developments, and a clear sense of commercial direction.

For companies working in this space, IP protection is not just a legal formality but a commercial lifeline. Those who can navigate the various – and evolving – regulatory frameworks while securing robust, defensible protection for their products will be best positioned to attract investment and hold onto a long-term competitive edge as new players enter the field.

Read our Microbiome Blogs

The Vaginal Microbiome – the hidden key to success in IVF?

The Vaginal Microbiome – the hidden key to success in IVF?

by Natalie Vaughan

In vitro fertilisation (IVF) as the names suggests, is a fertility treatment where an egg is fertilised by a sperm outside of the body. For many couples diagnosed with infertility, IVF offers hope of ...

Combatting AMR in UTIs

Combatting AMR in UTIs

by Sarah Harvey

Urinary tract infections (UTIs) are among the most common bacterial infections, affecting millions of people worldwide. The term ‘UTIs’ encompasses infections in any part of the urinary system (the ...

Brazil to join the Budapest Treaty

Brazil to join the Budapest Treaty

by Louise Atkins

On 11 June 2025, the Brazilian Senate approved the country’s accession to the Budapest Treaty1 — an international agreement that governs the deposit of microorganisms for patent purposes.

A Boost for Sustainable Agriculture: The Promise of the US “Plant Biostimulant Act”

A Boost for Sustainable Agriculture: The Promise of the US “Plant Biostimulant Act”

by Ben Tolley

In a welcome development for sustainable agriculture, United States Representatives Jimmy Panetta (CA-19) and Jim Baird (IN-04) have introduced the Plant Biostimulant Act of 2025; a bipartisan ...

Collecting Birthdays: Unveiling the Secrets of Extreme Human Longevity

Collecting Birthdays: Unveiling the Secrets of Extreme Human Longevity

by Emily Garnett

When 117-year-old, Maria Branyas Morera died in August last year, she was the world’s oldest living person. Born in San Francisco on 4 March 1907, Branyas lived her early years in the US before her ...

Resistance is futile – how new tech tackles AMR

Resistance is futile – how new tech tackles AMR

by Emily Lythell

Antimicrobial resistance (AMR) refers to the ability of microorganisms—bacteria, viruses, fungi, and parasites—to evolve and resist the effects of drugs that once effectively killed or inhibited ...

Learn More

Community Giving

GUTS UK

Research is finding that our microbiomes have a broad influence on our health, particularly our digestive health, and microbiome-related therapy is a fast-growing area of medical research.

Guts UK is a charity focussing on diseases and disorders of the gut, ranging from IBS to cancer. The charity works both to raise awareness and provide expert information on gut diseases and conditions, and also funds research in the field. We are proud supporters of Guts UK.

Guts UK brand beacon tilted right

IP Considerations for Protecting Microbiome Innovation

An average person contains 30 trillion human cells, but even more microbes – about 39 trillion. In addition, there are possibly ten times that number of viral particles in the human virome. Understanding an individual’s microbiome is becoming increasingly important for diagnosing a broad range of diseases.

The number of patent publications related to the microbiome is growing at a huge rate. From just two patent families in 2010 to several hundred per year now. Patents that relate to the microbiome often need to be drafted differently from patents covering small molecule drugs or conventional diagnostics. For instance, some inventions lie in a way of affecting or detecting a heterogenous population of microbial cells. The cells could be defined in various ways, such as by their function or by their degree of genetic relatedness to a reference organism. Other inventions lie in a way of assessing the impact of the heterogenous population of microbes on drug metabolism, which might require functional definitions and/or specific assays to be written into the claims.

Applicants for microbiome-based patents need to be aware of legal obstacles in certain jurisdictions that would make certain claims very difficult to obtain. As with any new treatment, it is absolutely essential to establish a strong IP position before undertaking the massive cost of clinically validating a microbiome based treatment. While at first glance it might seem hard to build a strong patent portfolio in this field because the active therapeutic ingredients may be either naturally occurring or well known, this is not necessarily the case if the therapeutic use is new and innovative. With new observations indicating a link between an absence of certain gut bacteria and diverse diseases such as cancer, depression and diabetes, the potential for personalised mental health interventions, looks set to continue to drive novel discoveries.

Open page of Microbiome article

Microbiome

Meet your Multitude

Studies of the human gut microbiome have revealed a complex network of interactions between microbial communities and immune cells.

Eliot Ward from Mewburn Ellis talks about how the health and wellbeing of each of us depends upon a number of vast communities of microbes that live in our gut, on our skin and in our sensory and reproductive organs.

Read the full article here